The automaker's plants and production lines in Japan are scheduled to operate normally for the first time in seven months.
The automaker will reduce output again in November, but the impact will not be as painful as before and Toyota sees signs of recovery on the horizon.
Toyota still faces a chip shortage, but the situation has improved from 12 months ago when COVID cases were causing factory shutdowns that led to a lack of parts.
The quake triggered a tsunami, caused blackouts as far away as Tokyo, derailed the country's famed bullet train and buckled highways that serve as critical supply arteries.
The latest stoppages will bring lost output to 9,000 vehicles, the automaker said, and affect production of Lexus models and the Land Cruiser.
The attack comes just after Japan joined Western allies in clamping down on Russia due to its invasion of Ukraine.
The planned four-day halt to production at a Tsutsumi factory line, which makes Camry and Corolla models, will cut vehicle output by as many as 1,500 vehicles.
Americans won't be affected because the Land Cruiser was dropped in the U.S.
The stoppages affect output of Lexus models and the Toyota Land Cruiser as the automaker runs short of components from plants in Southeast Asia where production has been disrupted.
Production lines will be switched back on at its 14 factories across the country, Toyota said.
Toyota's move to convert Japanese engine plants to build batteries is part of a wider $5.6 billion investment aimed at increasing battery capacity worldwide.
Japan's automakers are stoking R&D investment to meet mounting demand for a staggering array of technologies. Toyota by far outpaces the pack.
The automaker will suspend production on three lines at its Motomachi plant in September. That follows suspensions at its Tsutsumi plant.
The U.S.-based company operates 25 vehicles in nine cities including Arlington, Texas, and Hiroshima, Japan.
Hyundai's Ioniq 5 was named World Car of the Year, besting two other electric crossovers for the award.
Toyota said there was "a possibility" that it could lower its full-year production plan of 9.7 million vehicles as it faces a continuing shortage of parts due to the COVID-19 lockdowns in China.
Despite a 42 percent drop in quarterly profit, the automaker lifted its full-year guidance for net income and revenue.
Toyota CEO Akio Toyoda said the automaker was still pursuing a multi-pronged, carbon-reduction strategy that also includes hybrid cars and hydrogen-powered vehicles.